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Intron Name: Anas_platyrhynchos_platyrhynchos_11_2160742_2161475_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2160742 - 2161475

Intron Length:

734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAC

5'SS Class:

strong_major

3'SS Sequence:

CTTGTGTTGAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

GTGATCTTATTT

Flanking Amino Acid:

RLQEQTIKLKEMSNQLHHEP

Intron Amino Acid Position:

1241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

74.5

29.8

Major BPS

82.6

0.81

0.8

71.7

Major PPT

60.9

0.25

1.2

62.5

42.5

Minor 5ss

37.6

-1.4

3.2

49.9

46.6

Minor BPS

54.4

0.22

1.6

68.8

42.5

Associated Gene:

Gene:

MYO5C

Ensembl Gene ID:

ENSAPLG00000023919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029054

2152638 - 2187132

34495