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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21610311_21610826_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21610311 - 21610826

Intron Length:

516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGGAG

5'SS Class:

major

3'SS Sequence:

TTTGTTCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTCATTAATT

Flanking Amino Acid:

RQALLDLEQEFLADPHLSIS

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

66.3

39.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

89.6

0.89

0.7

84.2

30.9

Minor 5ss

27.9

-2.5

3.5

36.8

47.7

Minor BPS

82.6

1.1

1.4

97.41

26.4

Associated Gene:

Gene:

TUBGCP4

Ensembl Gene ID:

ENSAPLG00000010724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011226

21595511 - 21616832

21322