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Intron Name: Anas_platyrhynchos_platyrhynchos_11_2161570_2162689_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2161570 - 2162689

Intron Length:

1120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TTTTCTCTAAAA

Flanking Amino Acid:

EVSRLTSENMVIPDLKQQVS

Intron Amino Acid Position:

1210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

79.8

35.3

Major BPS

58.9

0.22

49.8

35.1

Major PPT

73.3

0.53

1.1

76.2

31.4

Minor 5ss

38.1

-1.3

3.1

47.2

43.7

Minor BPS

0.53

1.7

81.52

33.2

Associated Gene:

Gene:

MYO5C

Ensembl Gene ID:

ENSAPLG00000023919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029054

2152638 - 2187132

34495