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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21633442_21634173_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21633442 - 21634173

Intron Length:

732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAGA

5'SS Class:

strong_major

3'SS Sequence:

ATGTACATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACACTTTTAATG

Flanking Amino Acid:

QDLYGKVDFTEEEISNMRLE

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

74.1

36.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

68.1

0.41

64.2

41.7

Minor 5ss

32.2

-2

40.7

45.1

Minor BPS

53.8

-0

1.3

51.14

37.7

Associated Gene:

Gene:

IQGAP1

Ensembl Gene ID:

ENSAPLG00000011175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031763

21616360 - 21674243

57884

ENSAPLT00000024498

21616360 - 21674243

57884

ENSAPLT00000011766

21613782 - 21674243

60462

ENSAPLT00000044274

21616788 - 21674243

57456