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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21634288_21634586_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21634288 - 21634586

Intron Length:

299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTCAT

5'SS Class:

major

3'SS Sequence:

GCTTGTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

TGGCTCTCAGGC

Flanking Amino Acid:

ANELSVDEAALHAAVIAINE

Intron Amino Acid Position:

214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

76.1

34.8

Major BPS

58.6

0.22

1.5

38.9

Major PPT

83.3

0.75

0.9

80.2

37.3

Minor 5ss

32.9

-2

3.1

45.7

42.5

Minor BPS

41.8

-0.6

1.9

48.45

41.3

Associated Gene:

Gene:

IQGAP1

Ensembl Gene ID:

ENSAPLG00000011175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044274

21616788 - 21674243

57456

ENSAPLT00000031763

21616360 - 21674243

57884

ENSAPLT00000024498

21616360 - 21674243

57884

ENSAPLT00000011766

21613782 - 21674243

60462