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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21636165_21641142_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21636165 - 21641142

Intron Length:

4978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGAGA

5'SS Class:

strong_major

3'SS Sequence:

GGTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

TTTCACTCTACC

Flanking Amino Acid:

FLSDRQQKKEAGLTGLLQKE

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.4

40.1

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

86.9

0.83

0.8

84.6

Minor 5ss

37.7

-1.4

3.1

48.6

47.2

Minor BPS

49.5

-0

2.1

70.26

40.5

Associated Gene:

Gene:

IQGAP1

Ensembl Gene ID:

ENSAPLG00000011175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031763

21616360 - 21674243

57884

ENSAPLT00000024498

21616360 - 21674243

57884

ENSAPLT00000011766

21613782 - 21674243

60462

ENSAPLT00000044274

21616788 - 21674243

57456