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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21642553_21642780_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21642553 - 21642780

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

GTAGAATTAATT

Flanking Amino Acid:

LSTLQQQSHEGNLTHPELSV

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.2

26.3

Major BPS

0.82

0.8

24.9

Major PPT

78.1

0.63

0.9

36.4

Minor 5ss

37.7

-1.4

2.7

46.1

36.1

Minor BPS

49.3

0.03

1.9

68.08

42.3

Associated Gene:

Gene:

IQGAP1

Ensembl Gene ID:

ENSAPLG00000011175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031763

21616360 - 21674243

57884

ENSAPLT00000024498

21616360 - 21674243

57884

ENSAPLT00000011766

21613782 - 21674243

60462

ENSAPLT00000044274

21616788 - 21674243

57456