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Intron Name: Anas_platyrhynchos_platyrhynchos_11_21651588_21651964_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21651588 - 21651964

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAATCAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TGATACTTACAC

Flanking Amino Acid:

AEVKSGKMATGGNGSEWVKL

Intron Amino Acid Position:

678

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

0.9

70.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

83.2

0.75

0.8

81.5

30.6

Minor 5ss

28.4

-2.5

2.9

34.7

41.7

Minor BPS

49.6

-0

1.9

62.76

41.8

Associated Gene:

Gene:

IQGAP1

Ensembl Gene ID:

ENSAPLG00000011175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031763

21616360 - 21674243

57884

ENSAPLT00000024498

21616360 - 21674243

57884

ENSAPLT00000011766

21613782 - 21674243

60462

ENSAPLT00000044274

21616788 - 21674243

57456