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Intron Name: Anas_platyrhynchos_platyrhynchos_11_2182798_2183065_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2182798 - 2183065

Intron Length:

268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTGGTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATTGCACTAACC

Flanking Amino Acid:

VESKLIYTYSGIILVAINPY

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

100

1.24

0.5

100

Major PPT

70.8

0.47

64.4

41.6

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

52.9

0.07

71.04

39.7

Associated Gene:

Gene:

MYO5C

Ensembl Gene ID:

ENSAPLG00000023919

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029054

2152638 - 2187132

34495