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Intron Name: Anas_platyrhynchos_platyrhynchos_11_2191349_2192973_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2191349 - 2192973

Intron Length:

1625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGCTA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

GCTAATGTAATC

Flanking Amino Acid:

VLVSFIRTIQLRLRDRKDSP

Intron Amino Acid Position:

1835

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

71.4

40.1

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

92.5

0.96

0.6

88.1

21.6

Minor 5ss

40.4

-1.1

3.3

55.6

48.6

Minor BPS

43.7

-0.4

2.1

52.23

39.5

Associated Gene:

Gene:

MYO5A

Ensembl Gene ID:

ENSAPLG00000003054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026930

2190292 - 2270689

80398

ENSAPLT00000003317

2190292 - 2270689

80398

ENSAPLT00000048006

2190292 - 2270689

80398