Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_2205296_2207219_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2205296 - 2207219

Intron Length:

1924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTACCAGA

5'SS Class:

major

3'SS Sequence:

TCAACTTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

TGTTGCTCAACT

Flanking Amino Acid:

LVYEGLKQANRLLESQLQSQ

Intron Amino Acid Position:

1376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.4

45.3

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

0.41

0.8

35.5

Minor 5ss

40.6

-1

2.6

50.3

45.6

Minor BPS

64.8

0.54

85.32

40.8

Associated Gene:

Gene:

MYO5A

Ensembl Gene ID:

ENSAPLG00000003054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048006

2190292 - 2270689

80398

ENSAPLT00000003317

2190292 - 2270689

80398