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Intron Name: Anas_platyrhynchos_platyrhynchos_11_2233035_2236037_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2233035 - 2236037

Intron Length:

3003

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCCCTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

TTTCACAGAAAA

Flanking Amino Acid:

NEKLQQQFNMHVFKLEQEEY

Intron Amino Acid Position:

498

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.5

41.9

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

80.1

0.68

0.8

74.7

30.5

Minor 5ss

35.3

-1.7

2.7

39.4

40.3

Minor BPS

46.7

-0.2

66.04

38.9

Associated Gene:

Gene:

MYO5A

Ensembl Gene ID:

ENSAPLG00000003054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026930

2190292 - 2270689

80398

ENSAPLT00000003317

2190292 - 2270689

80398

ENSAPLT00000048006

2190292 - 2270689

80398