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Intron Name: Anas_platyrhynchos_platyrhynchos_11_2242099_2246063_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2242099 - 2246063

Intron Length:

3965

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTTTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

AGTTCTTCAACC

Flanking Amino Acid:

KVLASNPIMESIGNAKTTRN

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

83.2

0.75

0.7

79.1

26.6

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

67.7

0.54

1.5

74.08

36.3

Associated Gene:

Gene:

MYO5A

Ensembl Gene ID:

ENSAPLG00000003054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048006

2190292 - 2270689

80398

ENSAPLT00000026930

2190292 - 2270689

80398

ENSAPLT00000003317

2190292 - 2270689

80398