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Intron Name: Anas_platyrhynchos_platyrhynchos_11_2358099_2359413_R

Intron Information:

Intron Rank:

133945

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2358099 - 2359413

Intron Length:

1315

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTGGATTGAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTTTTTGATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.9

1.15

0.7

89.3

28.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

51.3

0.03

1.2

52.8

44.9

Minor 5ss

-2.8

4.1

39.6

46.4

Minor BPS

77.3

0.94

89.84

27.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019335

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035257

2354503 - 2360629

6127