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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_2359594_2359854_R

Intron Information:

Intron Rank:
133946
Intron Class:
major
Intron Phase:
Intron Coordinates:
2359594 - 2359854
Intron Length:
261

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CTG|GTATGTTCC
5'SS Class:
major
3'SS Sequence:
TAATTTCATGTAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATTTCAT
U12 Branch Point Sequence:
CCTTTCTTAATT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.9
0.7
1
70.2
34.6
Major BPS
91.2
1.02
0.7
91.7
20.2
Major PPT
71.8
0.49
0.9
67.4
38.8
Minor 5ss
47.7
-0.2
2.4
59.1
40.8
Minor BPS
76.9
0.92
1.2
82.74
39.5

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000019335
Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000035257
2354503 - 2360629
6127