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Intron Name: Anas_platyrhynchos_platyrhynchos_11_2635129_2642082_R

Intron Information:

Intron Rank:

146961

Intron Class:

major

Intron Phase:

Intron Coordinates:

2635129 - 2642082

Intron Length:

6954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGGAA

5'SS Class:

major

3'SS Sequence:

TTTTTTCTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

AAGTACTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.2

69.3

37.4

Major BPS

76.9

0.67

66.3

40.4

Major PPT

92.8

0.96

0.6

92.6

17.4

Minor 5ss

34.1

-1.8

3.6

46.2

49.1

Minor BPS

62.4

0.47

1.6

74.47

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046188

2617784 - 2643683

25900