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Intron Name: Anas_platyrhynchos_platyrhynchos_11_2707293_2709515_R

Intron Information:

Intron Rank:

141231

Intron Class:

major

Intron Phase:

Intron Coordinates:

2707293 - 2709515

Intron Length:

2223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

ATGTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

CAGTTCATAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

79.3

34.5

Major BPS

0.65

1.1

77.4

37.3

Major PPT

80.5

0.69

0.9

77.4

41.2

Minor 5ss

40.8

-1

3.4

63.8

41.6

Minor BPS

48.9

-0

1.9

65.23

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039895

2701134 - 2709597

8464