Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_2757919_2760756_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2757919 - 2760756

Intron Length:

2838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TCCATTTGCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTTCTTTCCATT

Flanking Amino Acid:

KLPYRHTAIYYYHCSFRMTG

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

89.1

24.1

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

71.9

0.49

0.9

67.2

37.9

Minor 5ss

41.7

-0.9

2.8

41.5

Minor BPS

45.5

-0.2

1.9

64.38

41.1

Associated Gene:

Gene:

WDR72

Ensembl Gene ID:

ENSAPLG00000009012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009374

2749589 - 2764985

15397