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Intron Name: Anas_platyrhynchos_platyrhynchos_11_2760836_2763634_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2760836 - 2763634

Intron Length:
2799

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTAGGTAAC

5'SS Class:
major

3'SS Sequence:
TTGTTTTTGGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATATGAA

U12 Branch Point Sequence:
GTAATATGAAAT

Flanking Amino Acid:
QPYVVSATENGEMCVWNVAS

Intron Amino Acid Position:
89

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.8
0.66
1.1
72.3
39.5

Major BPS
66.7
0.41
1
57.8
39

Major PPT
82.2
0.72
1
80.6
37

Minor 5ss
34.2
-1.8
3
36.5
40.9

Minor BPS
45.6
-0.2
1.8
62.27
40.4

Associated Gene:

Gene:
WDR72

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2749589 - 2764985
15397

2758643 - 2764985
6343