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Intron Name: Anas_platyrhynchos_platyrhynchos_11_2954387_2955321_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2954387 - 2955321

Intron Length:

935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TTTTGCACATTT

Flanking Amino Acid:

FSSYCDKENVSCILMNNIQQ

Intron Amino Acid Position:

718

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.8

81.1

26.8

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

85.6

0.8

0.7

81.4

30.6

Minor 5ss

29.7

-2.3

2.6

30.1

36.9

Minor BPS

44.8

-0.3

2.3

73.09

Associated Gene:

Gene:

UNC13C

Ensembl Gene ID:

ENSAPLG00000007445

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007770

2892909 - 2993043

100135