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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3122099_3122871_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3122099 - 3122871

Intron Length:

773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

AGCACTTTAACA

Flanking Amino Acid:

KYQRELWNKTVDAMKRVEEI

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

75.8

35.2

Major BPS

77.3

0.68

79.3

29.4

Major PPT

82.5

0.73

0.9

80.2

37.3

Minor 5ss

30.6

-2.2

2.9

Minor BPS

66.1

0.5

1.3

67.23

39.1

Associated Gene:

Gene:

RSL24D1

Ensembl Gene ID:

ENSAPLG00000016498

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029591

3119865 - 3127830

7966