Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_3136117_3136852_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3136117 - 3136852

Intron Length:

736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTACGGCAT

5'SS Class:

major

3'SS Sequence:

TTATTTCTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATTAT

U12 Branch Point Sequence:

TAAGTCATGACT

Flanking Amino Acid:

QSFLNVRNWISQLQMHAYCE

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

63.5

42.6

Major BPS

0.42

1.3

60.1

46.3

Major PPT

76.5

0.6

0.9

36.2

Minor 5ss

33.1

-1.9

3.6

46.9

43.1

Minor BPS

50.6

0.1

1.7

69.29

41.5

Associated Gene:

Gene:

RAB27A

Ensembl Gene ID:

ENSAPLG00000002447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002468

3132247 - 3140229

7983