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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3136957_3137731_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3136957 - 3137731

Intron Length:

775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

ATGTGCTGAATA

Flanking Amino Acid:

LQLWDTAGQERFRSLTTAFF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

74.4

0.55

0.9

66.4

40.7

Minor 5ss

53.1

0.1

2.3

69.7

41.2

Minor BPS

54.5

0.14

1.9

66.48

40.3

Associated Gene:

Gene:

RAB27A

Ensembl Gene ID:

ENSAPLG00000002447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002468

3132247 - 3140229

7983