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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3137818_3140076_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3137818 - 3140076

Intron Length:

2259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTACCATTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAC

U12 Branch Point Sequence:

AGTCTTGCAAAT

Flanking Amino Acid:

VGIDFREKRVVYRPNGPDGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

85.7

25.5

Major BPS

0.5

0.9

61.4

35.9

Major PPT

68.3

0.41

1.1

68.4

36.4

Minor 5ss

40.8

-1

43.6

Minor BPS

-0.6

2.1

57.77

38.8

Associated Gene:

Gene:

RAB27A

Ensembl Gene ID:

ENSAPLG00000002447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002468

3132247 - 3140229

7983