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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3181277_3184731_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3181277 - 3184731

Intron Length:

3455

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTATCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AAGTTTTTATCT

Flanking Amino Acid:

AISMGFGHFYGTIQIQKRQQ

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.8

81.9

26.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

86.6

0.82

0.7

85.5

29.1

Minor 5ss

38.5

-1.3

2.9

45.9

43.7

Minor BPS

58.2

0.34

1.6

70.7

40.6

Associated Gene:

Gene:

CCPG1

Ensembl Gene ID:

ENSAPLG00000002976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003038

3174144 - 3193726

19583