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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3189198_3189386_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3189198 - 3189386

Intron Length:

189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACTTAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTACATTATCT

Flanking Amino Acid:

AFEETQTVPEGRKEKVHDDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

1.1

30.2

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

81.3

0.71

0.7

81.1

24.1

Minor 5ss

47.4

-0.3

2.7

66.9

44.4

Minor BPS

63.6

0.5

1.9

86.38

39.1

Associated Gene:

Gene:

CCPG1

Ensembl Gene ID:

ENSAPLG00000002976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003038

3174144 - 3193726

19583