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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3189467_3190059_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3189467 - 3190059

Intron Length:

593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTATGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTCTTATGT

Flanking Amino Acid:

QEEEQPIDLQAQHSTDGEVP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

72.5

39.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.5

0.78

0.8

81.9

28.9

Minor 5ss

38.3

-1.3

3.4

56.2

Minor BPS

66.5

0.6

1.9

87.15

38.9

Associated Gene:

Gene:

CCPG1

Ensembl Gene ID:

ENSAPLG00000002976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003038

3174144 - 3193726

19583