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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3253792_3254211_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3253792 - 3254211

Intron Length:

420

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TCTTTTTTTAAAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

CTTTTTTTAAAG

Flanking Amino Acid:

DQTVSTPGCVSVRDRMVPPP

Intron Amino Acid Position:

683

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

78.6

35.6

Major BPS

73.5

0.58

79.3

29.4

Major PPT

83.5

0.75

0.9

85.6

26.4

Minor 5ss

41.5

-0.9

3.5

68.1

42.7

Minor BPS

65.7

0.35

1.5

67.62

40.4

Associated Gene:

Gene:

PRTG

Ensembl Gene ID:

ENSAPLG00000003723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003859

3242495 - 3322567

80073