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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3254308_3278368_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3254308 - 3278368

Intron Length:

24061

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTGTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTGTCTTGATT

Flanking Amino Acid:

SDLEYTVSGLDPRRKYHVRL

Intron Amino Acid Position:

651

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.6

22.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

83.5

0.75

0.8

79.9

32.1

Minor 5ss

30.8

-2.2

3.2

39.9

46.1

Minor BPS

72.3

0.78

1.3

86.06

34.4

Associated Gene:

Gene:

PRTG

Ensembl Gene ID:

ENSAPLG00000003723

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003859

3242495 - 3322567

80073