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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3339850_3339926_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3339850 - 3339926

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

AAATACTTAAAG

Flanking Amino Acid:

TPEKLPRAHTCFNRLDLPPY

Intron Amino Acid Position:

842

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.8

88.7

25.1

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

89.5

0.89

0.7

87.9

29.5

Minor 5ss

36.4

-1.5

48.3

41.8

Minor BPS

56.4

0.06

1.7

59.03

41.5

Associated Gene:

Gene:

NEDD4

Ensembl Gene ID:

ENSAPLG00000004254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040492

3339747 - 3353596

13850

ENSAPLT00000004472

3339747 - 3385127

45381