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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3343275_3343902_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3343275 - 3343902

Intron Length:

628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCATGA

5'SS Class:

weak_major

3'SS Sequence:

TTATCATACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

AAAACTTTAATT

Flanking Amino Acid:

NHQVIQWFWKAVLMMDSEKR

Intron Amino Acid Position:

786

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.2

61.3

40.1

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

71.5

0.48

66.1

38.8

Minor 5ss

48.9

-0.1

2.6

65.5

45.6

Minor BPS

66.5

0.6

1.2

73.41

37.2

Associated Gene:

Gene:

NEDD4

Ensembl Gene ID:

ENSAPLG00000004254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040492

3339747 - 3353596

13850

ENSAPLT00000004472

3339747 - 3385127

45381