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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3344804_3344942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3344804 - 3344942

Intron Length:

139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTAAAA

Flanking Amino Acid:

VTNKNKRDYIHLVIQWRFVS

Intron Amino Acid Position:

709

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

75.9

39.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

98.8

1.1

0.5

95.2

16.3

Minor 5ss

39.6

-1.2

2.9

57.1

41.1

Minor BPS

70.8

0.65

1.5

81.76

32.7

Associated Gene:

Gene:

NEDD4

Ensembl Gene ID:

ENSAPLG00000004254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040492

3339747 - 3353596

13850

ENSAPLT00000004472

3339747 - 3385127

45381