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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3350401_3351197_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3350401 - 3351197

Intron Length:

797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTTCT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

RLQNVAITGPAVPYSRDYKR

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

75.5

Major BPS

0.65

1.5

85.7

34.9

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

-0.5

2.8

65.4

39.4

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

NEDD4

Ensembl Gene ID:

ENSAPLG00000004254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040492

3339747 - 3353596

13850

ENSAPLT00000004472

3339747 - 3385127

45381