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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3354329_3356086_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3354329 - 3356086

Intron Length:

1758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATTCT

5'SS Class:

strong_major

3'SS Sequence:

CCCATACTTCAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TCTCCCATACTT

Flanking Amino Acid:

SATGQSTAYMNHSGRRGSLQ

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

76.5

32.9

Major BPS

0.65

1.1

77.4

37.3

Major PPT

60.3

0.23

1.1

56.2

38.1

Minor 5ss

42.3

-0.8

2.9

56.2

43.3

Minor BPS

52.6

0.16

1.9

74.18

42.8

Associated Gene:

Gene:

NEDD4

Ensembl Gene ID:

ENSAPLG00000004254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004472

3339747 - 3385127

45381