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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3359026_3379010_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3359026 - 3379010

Intron Length:

19985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTCCT

5'SS Class:

major

3'SS Sequence:

TCTCTTATTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAA

Flanking Amino Acid:

LFEVFDENRLTENPSMERPY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

42.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

85.1

0.79

0.8

77.3

35.6

Minor 5ss

35.6

-1.6

3.2

47.6

42.2

Minor BPS

76.9

0.84

1.2

83.98

29.3

Associated Gene:

Gene:

NEDD4

Ensembl Gene ID:

ENSAPLG00000004254

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004472

3339747 - 3385127

45381