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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3413288_3413971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3413288 - 3413971

Intron Length:

684

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTATGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTGTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

ACGAAAGTAACC

Flanking Amino Acid:

NLDFHKTGDGLDGTEPSGQL

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

76.7

34.9

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

0.7

0.9

77.2

37.1

Minor 5ss

47.5

-0.2

2.5

57.9

46.7

Minor BPS

39.9

-0.7

2.2

47.63

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024837

3413057 - 3424530

11474