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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3416322_3423445_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3416322 - 3423445

Intron Length:

7124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

ATTCCATTCACG

Flanking Amino Acid:

LPKQEVYDEYKSYCDNLGYH

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

77.7

30.1

Major BPS

81.9

0.79

0.8

81.9

Major PPT

84.4

0.77

0.8

79.6

32.4

Minor 5ss

31.6

-2.1

3.2

41.8

38.8

Minor BPS

-0.1

2.1

64.83

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024837

3413057 - 3424530

11474