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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3504114_3504985_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3504114 - 3504985

Intron Length:

872

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCTGTTGTT

5'SS Class:

major

3'SS Sequence:

GAGAAAAGACAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACGTGAA

U12 Branch Point Sequence:

TGAACTCGAAGA

Flanking Amino Acid:

FKYFLYPMQQENIRLIVEEE

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.3

74.1

39.7

Major BPS

50.7

0.02

1.2

39.5

Major PPT

40.9

-0.5

1.1

21.5

34.5

Minor 5ss

23.3

-3.1

4.1

40.9

45.4

Minor BPS

42.1

-0.6

1.9

51.67

39.4

Associated Gene:

Gene:

MNS1

Ensembl Gene ID:

ENSAPLG00000006558

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006823

3502936 - 3511144

8209