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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3507261_3507332_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3507261 - 3507332

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTACTTTGT

5'SS Class:

weak_major

3'SS Sequence:

AGAATCTACAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTGCCCAGAATC

Flanking Amino Acid:

AMVLKFDIIKEEQQKREELE

Intron Amino Acid Position:

333

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.6

0.16

1.2

56.4

43.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

44.7

-0.3

1.7

43.1

41.7

Minor 5ss

42.2

-0.9

3.1

44.3

Minor BPS

51.9

0.04

1.8

66.07

39.2

Associated Gene:

Gene:

MNS1

Ensembl Gene ID:

ENSAPLG00000006558

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028819

3502936 - 3511531

8596