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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3508606_3509502_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3508606 - 3509502

Intron Length:

897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATTAGT

5'SS Class:

major

3'SS Sequence:

TTCCCCCTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GGAATCTTAATT

Flanking Amino Acid:

EKEAIQYEKMKRDAEIAQKM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

76.4

38.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

78.6

0.64

0.7

73.4

24.7

Minor 5ss

37.7

-1.4

2.8

48.9

41.9

Minor BPS

63.8

0.51

1.3

71.11

39.5

Associated Gene:

Gene:

MNS1

Ensembl Gene ID:

ENSAPLG00000006558

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028819

3502936 - 3511531

8596

ENSAPLT00000006823

3502936 - 3511144

8209