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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3509606_3511073_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3509606 - 3511073

Intron Length:

1468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACGGG

5'SS Class:

major

3'SS Sequence:

TTTTTCCCCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TACCTTGTAATA

Flanking Amino Acid:

EKMRQQVRENSLELRELEKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

60.4

44.7

Major BPS

84.4

0.85

1.1

34.5

Major PPT

81.1

0.7

74.7

30.6

Minor 5ss

35.1

-1.7

3.4

46.8

48.5

Minor BPS

47.1

-0.2

1.9

56.69

37.3

Associated Gene:

Gene:

MNS1

Ensembl Gene ID:

ENSAPLG00000006558

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028819

3502936 - 3511531

8596

ENSAPLT00000006823

3502936 - 3511144

8209