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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3782650_3785803_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3782650 - 3785803

Intron Length:

3154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAGAA

U12 Branch Point Sequence:

TTTTCTGTTACA

Flanking Amino Acid:

VILSLEQQVRERNLNPKAAC

Intron Amino Acid Position:

536

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

81.3

32.8

Major BPS

58.2

0.21

1.1

55.4

40.4

Major PPT

88.8

0.87

0.8

83.7

31.3

Minor 5ss

30.6

-2.2

2.6

36.7

40.4

Minor BPS

57.4

0.23

2.3

78.96

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007562

3750728 - 3785957

35230