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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3846964_3847472_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3846964 - 3847472

Intron Length:

509

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTGAGTGCA

5'SS Class:

major

3'SS Sequence:

TTTTCCTGATGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATTAAA

U12 Branch Point Sequence:

TCTTCTCTGATT

Flanking Amino Acid:

NEKELRQNLEELFQVKMEQE

Intron Amino Acid Position:

677

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

64.8

35.1

Major BPS

70.2

0.5

71.6

30.1

Major PPT

55.6

0.13

1.7

70.7

39.8

Minor 5ss

28.8

-2.4

36.8

Minor BPS

61.8

0.45

1.6

79.25

37.5

Associated Gene:

Gene:

CGNL1

Ensembl Gene ID:

ENSAPLG00000007650

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007971

3841502 - 3875227

33726