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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3866280_3866741_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3866280 - 3866741

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAGCT

5'SS Class:

strong_major

3'SS Sequence:

ACATTTTTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

AGAAAAATAAAA

Flanking Amino Acid:

NKTIEKLKEEMAEVVEVSRT

Intron Amino Acid Position:

949

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

74.3

34.2

Major BPS

75.6

0.64

1.5

34.5

Major PPT

78.8

0.65

0.9

76.9

36.4

Minor 5ss

39.2

-1.2

3.4

56.9

47.4

Minor BPS

38.9

-0.8

1.9

45.92

Associated Gene:

Gene:

CGNL1

Ensembl Gene ID:

ENSAPLG00000007650

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007971

3841502 - 3875227

33726