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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3868518_3869325_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3868518 - 3869325

Intron Length:

808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAGAC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCCATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

TTGAAATTACTT

Flanking Amino Acid:

DRARQIKLMEDKLSHLELEL

Intron Amino Acid Position:

1060

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

71.9

31.5

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

76.2

0.59

0.9

75.1

Minor 5ss

30.1

-2.3

3.4

40.8

45.7

Minor BPS

46.1

-0.2

66.84

43.8

Associated Gene:

Gene:

CGNL1

Ensembl Gene ID:

ENSAPLG00000007650

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007971

3841502 - 3875227

33726