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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3869416_3875113_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3869416 - 3875113

Intron Length:

5698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTCAAA

5'SS Class:

major

3'SS Sequence:

CTTTCTGCAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTTTATTAAAAT

Flanking Amino Acid:

SERISRCREQIEQMRTELLQ

Intron Amino Acid Position:

1090

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

67.2

39.8

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

69.8

0.45

0.9

66.2

34.5

Minor 5ss

37.7

-1.4

3.1

48.8

Minor BPS

58.1

0.33

1.9

82.06

39.2

Associated Gene:

Gene:

CGNL1

Ensembl Gene ID:

ENSAPLG00000007650

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007971

3841502 - 3875227

33726