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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3907492_3908450_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3907492 - 3908450

Intron Length:

959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTTTGAAGT

5'SS Class:

weak_major

3'SS Sequence:

TTTTCCTGCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

TTCTATATAAAA

Flanking Amino Acid:

FQDYILFMEFVTNAHQESLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.1

0.05

1.2

54.9

41.6

Major BPS

69.8

0.49

70.3

31.8

Major PPT

81.4

0.71

0.8

80.8

31.1

Minor 5ss

40.2

-1.1

2.9

56.6

41.7

Minor BPS

49.6

-0

1.9

66.52

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008386

3907333 - 3941794

34462