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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3912760_3914471_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3912760 - 3914471

Intron Length:

1712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAGAG

5'SS Class:

strong_major

3'SS Sequence:

TATTGTTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

ATAGCATTTATT

Flanking Amino Acid:

LDRLIERMEEERHQLQKQLE

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

67.7

37.6

Major BPS

76.3

0.65

67.3

39.3

Major PPT

0.56

73.8

41.4

Minor 5ss

35.9

-1.6

3.3

46.1

49.1

Minor BPS

48.3

-0

68.25

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008386

3907333 - 3941794

34462