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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3939038_3939117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3939038 - 3939117

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGCGCG

5'SS Class:

major

3'SS Sequence:

CCTTTTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAATAA

U12 Branch Point Sequence:

TCCGCGTAAATA

Flanking Amino Acid:

LRRQRRLLADRKFIARLPDK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

57.1

42.2

Major BPS

50.5

0.01

1.1

47.7

35.7

Major PPT

84.7

0.78

0.7

80.6

24.7

Minor 5ss

31.7

-2.1

3.3

39.7

45.8

Minor BPS

43.8

-0.4

2.3

53.78

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020116

3938925 - 3941794

2870

ENSAPLT00000028111

3938925 - 3941794

2870