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Intron Name: Anas_platyrhynchos_platyrhynchos_11_3939319_3939432_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3939319 - 3939432

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGA|GCAATCCCC

5'SS Class:

weak_major

3'SS Sequence:

CAGCTGTAGGAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATGTAT

U12 Branch Point Sequence:

GCCACAGAAACA

Flanking Amino Acid:

QAAPQDTLSRDQRTLGDDDK

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.2

0.01

1.4

53.6

41.9

Major BPS

54.9

0.12

1.4

55.4

41.7

Major PPT

47.4

-0.1

1.2

44.8

40.5

Minor 5ss

30.2

-2.3

39.6

Minor BPS

38.1

-0.9

2.3

45.48

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008051

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008386

3907333 - 3941794

34462